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[ Kaynak: discosnp ]
Paket: discosnp (1:2.6.2-1)
discosnp için bağlantılar
Trisquel Kaynakları:
discosnp Kaynak Paketini İndir:
Geliştirici:
Original Maintainers:
- Debian Med Packaging Team (Posta Arşivi)
- Olivier Sallou
- Andreas Tille
Dış Kaynaklar:
- Ana Sayfa [colibread.inria.fr]
Benzer paketler:
discovering Single Nucleotide Polymorphism from raw set(s) of reads
Software discoSnp is designed for discovering Single Nucleotide Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation Sequencers (NGS).
Note that number of input read sets is not constrained, it can be one, two, or more. Note also that no other data as reference genome or annotations are needed.
The software is composed by two modules. First module, kissnp2, detects SNPs from read sets. A second module, kissreads, enhance the kissnp2 results by computing per read set and for each found SNP:
1) its mean read coverage 2) the (phred) quality of reads generating the polymorphism.
This program is superseded by DiscoSnp++.
discosnp ile İlgili Diğer Paketler
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- dep: gatb-core
- Genome Analysis Toolbox with de-Bruijn graph
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
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- dep: libgatbcore3 (>= 1.4.2+dfsg)
- dynamic library of the Genome Analysis Toolbox
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- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
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- dep: libhdf5-103-1
- HDF5 C runtime files - serial version
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
discosnp indir
| Mimari | Paket Boyutu | Kurulu Boyut | Dosyalar |
|---|---|---|---|
| arm64 | 1.408,8 kB | 2569 kB | [dosya listesi] |