[ aramo ]
[ Quellcode: ggd-utils ]
Paket: ggd-utils (1.0.0+ds-1)
Links für ggd-utils
Trisquel-Ressourcen:
Quellcode-Paket ggd-utils herunterladen:
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Nilesh Patra
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
Andere Pakete mit Bezug zu ggd-utils
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
ggd-utils herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 1.809,6 kB | 4933 kB | [Liste der Dateien] |
| arm64 | 1.633,2 kB | 4765 kB | [Liste der Dateien] |
| armhf | 1.594,1 kB | 4335 kB | [Liste der Dateien] |
| ppc64el | 1.519,1 kB | 4775 kB | [Liste der Dateien] |