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[ Kaynak: ggd-utils  ]

Paket: ggd-utils (1.0.0+ds-1)

programs for use in ggd

Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that: 

    * a .tbi is present
    * the VCF has ""##fileformat=VCF" as the first
    line
    * the VCF has a #CHROM header
    * the chromosome are in the order specified by
    the genome file (and present)
    * the positions are sorted
    * the positions are <= the chromosome lengths
    defined in the genome file.

As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes

ggd-utils ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

ggd-utils indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 1.809,6 kB4933 kB [dosya listesi]
arm64 1.633,2 kB4765 kB [dosya listesi]
armhf 1.594,1 kB4335 kB [dosya listesi]
ppc64el 1.519,1 kB4775 kB [dosya listesi]