Skip to content
Sections
>> Trisquel >> Paquets >> aramo >> science >> unikmer
aramo  ]
[ Paquet source : unikmer  ]

Paquet : unikmer (0.18.8-1)

Toolkit for nucleic acid k-mer analysis

unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.

K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.

TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.

Autres paquets associés à unikmer

  • dépendances
  • recommandations
  • suggestions
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    un paquet virtuel est également fourni par libc6-udeb

Télécharger unikmer

Télécharger pour toutes les architectures proposées
Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 2 447,7 ko7150 ko [liste des fichiers]
arm64 2 189,5 ko6910 ko [liste des fichiers]
armhf 2 169,1 ko6297 ko [liste des fichiers]
ppc64el 2 054,4 ko6951 ko [liste des fichiers]