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Pakket: unikmer (0.18.8-1)

Toolkit for nucleic acid k-mer analysis

unikmer is a golang package and a toolkit for nucleic acid k-mer analysis, providing functions including set operation k-mers optional with TaxIDs but without count information.

K-mers are either encoded (k<=32) or hashed (arbitrary k) into uint64, and serialized in binary file with extension .unik.

TaxIDs can be assigned when counting k-mers from genome sequences, and LCA (Lowest Common Ancestor) is computed during set opertions including computing union, intersecton, set difference, unique and repeated k-mers.

Andere aan unikmer gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    Ook een virtueel pakket geboden door: libc6-udeb

unikmer downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 2.447,7 kB7150 kB [overzicht]
arm64 2.189,5 kB6910 kB [overzicht]
armhf 2.169,1 kB6297 kB [overzicht]
ppc64el 2.054,4 kB6951 kB [overzicht]