[ nabia ]
[ aramo ]
[ Källkod: cyvcf2 ]
Paket: python3-cyvcf2 (0.30.14-1build1)
Länkar för python3-cyvcf2
Trisquelresurser:
Hämta källkodspaketet cyvcf2:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Steffen Moeller
- Liubov Chuprikova
- Nilesh Patra
Externa resurser:
- Hemsida [github.com]
Liknande paket:
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
Andra paket besläktade med python3-cyvcf2
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.7) [armhf]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11)
- dep: python3 (>= 3.10~)
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- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
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- dep: python3-coloredlogs
- colored terminal output for Python 3's logging module
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- dep: python3-numpy (>= 1:1.20.0)
- Fast array facility to the Python 3 language
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- dep: python3-numpy-abi9
- virtuellt paket som tillhandahålls av python3-numpy
Hämta python3-cyvcf2
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 817,0 kbyte | 4733 kbyte | [filförteckning] |
| arm64 | 806,8 kbyte | 4671 kbyte | [filförteckning] |
| armhf | 794,9 kbyte | 4455 kbyte | [filförteckning] |
| ppc64el | 874,8 kbyte | 5036 kbyte | [filförteckning] |